Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 AC010336.2-201ENST00000564226 506 ntBASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 MTHFR-217ENST00000641820 1569 ntBASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 AC015922.1-201ENST00000421102 1152 ntBASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 RN7SL618P-201ENST00000477850 296 ntBASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 AC190387.1-201ENST00000551683 408 ntBASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 AL033527.5-202ENST00000641632 1098 ntBASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIP2Q9UDT6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 SPTLC1P1-201ENST00000447199 261 ntBASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 AC044860.1-202ENST00000559481 777 ntBASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIP2Q9UDT6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLIP2Q9UDT6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
CLIP2Q9UDT6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLIP2Q9UDT6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLIP2Q9UDT6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms