Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 AC134915.1-201ENST00000426461 574 ntBASIC17.86■□□□□ 0.45
COL20A1Q9P218 AL162726.2-201ENST00000438986 1017 ntBASIC17.86■□□□□ 0.45
COL20A1Q9P218 AC022210.1-201ENST00000449856 793 ntBASIC17.86■□□□□ 0.45
COL20A1Q9P218 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COL20A1Q9P218 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL20A1Q9P218 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 MSTO2P-201ENST00000314835 1709 ntBASIC17.85■□□□□ 0.45
COL20A1Q9P218 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 ANKRD19P-201ENST00000338192 862 ntBASIC17.85■□□□□ 0.45
COL20A1Q9P218 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 CLUHP6-201ENST00000580789 941 ntBASIC17.85■□□□□ 0.45
COL20A1Q9P218 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 AC015936.2-201ENST00000593177 259 ntBASIC17.85■□□□□ 0.45
COL20A1Q9P218 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.85■□□□□ 0.45
COL20A1Q9P218 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL20A1Q9P218 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 AP003680.1-201ENST00000598970 3660 ntBASIC17.84■□□□□ 0.45
COL20A1Q9P218 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 AC138932.1-201ENST00000534164 6830 ntBASIC17.84■□□□□ 0.45
COL20A1Q9P218 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 C1QBPP1-201ENST00000400117 770 ntBASIC17.84■□□□□ 0.45
COL20A1Q9P218 ACTG1P3-201ENST00000431775 1114 ntBASIC17.84■□□□□ 0.45
COL20A1Q9P218 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 AC015910.1-201ENST00000579400 975 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms