Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO28Q9NVF7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
FBXO28Q9NVF7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO28Q9NVF7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.2■□□□□ 0.5
FBXO28Q9NVF7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.2■□□□□ 0.5
FBXO28Q9NVF7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
FBXO28Q9NVF7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO28Q9NVF7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO28Q9NVF7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 AP005482.1-201ENST00000563722 1273 ntBASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 AC000095.1-201ENST00000603208 874 ntBASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO28Q9NVF7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 LINC02199-201ENST00000506655 2702 ntBASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 AC011477.6-201ENST00000604980 1927 ntBASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 SOCS2P1-201ENST00000417727 557 ntBASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 MIR4313-201ENST00000580760 101 ntBASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 MIR6799-201ENST00000620297 69 ntBASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 AC005252.2-201ENST00000624630 1141 ntBASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 AC093525.8-201ENST00000624099 1342 ntBASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO28Q9NVF7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 KRT43P-201ENST00000434019 910 ntBASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 CTBP2P5-201ENST00000454986 1264 ntBASIC18.17■□□□□ 0.5
FBXO28Q9NVF7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms