Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 MIR943-201ENST00000401286 94 ntBASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 FO393414.2-201ENST00000405153 598 ntBASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 SPDYE17-201ENST00000412399 783 ntBASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 AL079307.3-201ENST00000556114 283 ntBASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 AC106028.4-201ENST00000614509 607 ntBASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDHAF3Q9NRP4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 AC011477.6-201ENST00000604980 1927 ntBASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 IGHV3-42-201ENST00000520410 361 ntBASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 AC027369.6-201ENST00000525520 931 ntBASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 BANF1P1-201ENST00000553684 263 ntBASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 AL133215.2-201ENST00000609242 977 ntBASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 MIR6069-201ENST00000620069 79 ntBASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 KRT8P12-202ENST00000472924 1397 ntBASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 FO538757.1-201ENST00000623083 1397 ntBASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDHAF3Q9NRP4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms