Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 TPM4P1-201ENST00000436100 807 ntBASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 AC074386.1-202ENST00000463561 864 ntBASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 AC098859.1-201ENST00000502915 1238 ntBASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 AC112191.1-201ENST00000523689 701 ntBASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 PDPK2P-202ENST00000562415 1191 ntBASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 AC034105.1-201ENST00000563488 319 ntBASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 AL136379.1-201ENST00000623471 2642 ntBASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.79□□□□□ -0.04
POLR2J3Q9H1A7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 AC138035.3-201ENST00000622706 2791 ntBASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 AC105233.2-201ENST00000523697 349 ntBASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 AF228730.5-201ENST00000530288 346 ntBASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 AC243562.2-201ENST00000561247 970 ntBASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms