Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.55■□□□□ 0.24
LRRC3Q9BY71 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.55■□□□□ 0.24
LRRC3Q9BY71 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 SLED1-202ENST00000512051 380 ntBASIC16.55■□□□□ 0.24
LRRC3Q9BY71 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 AL359711.2-201ENST00000563105 872 ntBASIC16.55■□□□□ 0.24
LRRC3Q9BY71 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 BTNL10-201ENST00000595971 695 ntBASIC16.55■□□□□ 0.24
LRRC3Q9BY71 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 MIR6775-201ENST00000617557 69 ntBASIC16.55■□□□□ 0.24
LRRC3Q9BY71 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC3Q9BY71 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 KRT8P22-201ENST00000562317 1415 ntBASIC16.54■□□□□ 0.24
LRRC3Q9BY71 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 ANKRD19P-201ENST00000338192 862 ntBASIC16.54■□□□□ 0.24
LRRC3Q9BY71 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC3Q9BY71 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms