Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 AC138951.2-201ENST00000623455 1161 ntBASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 BTBD6P1-201ENST00000412176 1267 ntBASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 CD8B2-202ENST00000417670 633 ntBASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 AC007969.1-201ENST00000433675 447 ntBASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 AC005695.3-201ENST00000614522 232 ntBASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTFDC1Q9BY42 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 ELK2AP-201ENST00000392510 1007 ntBASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 KRT18P25-201ENST00000508931 1278 ntBASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms