Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.16□□□□□ -0.46
VGLL1Q99990 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.16□□□□□ -0.46
VGLL1Q99990 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.16□□□□□ -0.46
VGLL1Q99990 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 AL121912.1-201ENST00000603683 238 ntBASIC12.16□□□□□ -0.46
VGLL1Q99990 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.16□□□□□ -0.46
VGLL1Q99990 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.16□□□□□ -0.46
VGLL1Q99990 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.16□□□□□ -0.46
VGLL1Q99990 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.16□□□□□ -0.46
VGLL1Q99990 AC087481.3-201ENST00000602886 1894 ntBASIC12.16□□□□□ -0.46
VGLL1Q99990 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.16□□□□□ -0.46
VGLL1Q99990 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.16□□□□□ -0.46
VGLL1Q99990 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.16□□□□□ -0.46
VGLL1Q99990 AC006486.2-201ENST00000624246 2199 ntBASIC12.16□□□□□ -0.46
VGLL1Q99990 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.16□□□□□ -0.46
VGLL1Q99990 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
VGLL1Q99990 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.16□□□□□ -0.46
VGLL1Q99990 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.16□□□□□ -0.46
VGLL1Q99990 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VGLL1Q99990 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
VGLL1Q99990 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.15□□□□□ -0.46
VGLL1Q99990 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
VGLL1Q99990 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.15□□□□□ -0.46
VGLL1Q99990 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
VGLL1Q99990 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.15□□□□□ -0.46
VGLL1Q99990 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.15□□□□□ -0.46
VGLL1Q99990 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.15□□□□□ -0.46
VGLL1Q99990 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
VGLL1Q99990 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
VGLL1Q99990 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.15□□□□□ -0.46
VGLL1Q99990 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.15□□□□□ -0.46
VGLL1Q99990 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.15□□□□□ -0.46
VGLL1Q99990 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.15□□□□□ -0.46
VGLL1Q99990 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
VGLL1Q99990 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
VGLL1Q99990 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.15□□□□□ -0.46
VGLL1Q99990 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 KRT18P34-201ENST00000488218 1270 ntBASIC12.15□□□□□ -0.46
VGLL1Q99990 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.15□□□□□ -0.46
VGLL1Q99990 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.15□□□□□ -0.46
VGLL1Q99990 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
VGLL1Q99990 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.15□□□□□ -0.46
VGLL1Q99990 FAM215A-202ENST00000632077 792 ntBASIC12.15□□□□□ -0.46
VGLL1Q99990 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.15□□□□□ -0.46
VGLL1Q99990 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
VGLL1Q99990 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VGLL1Q99990 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.15□□□□□ -0.46
VGLL1Q99990 CICP14-201ENST00000629111 2732 ntBASIC12.15□□□□□ -0.47
VGLL1Q99990 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
VGLL1Q99990 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.15□□□□□ -0.47
VGLL1Q99990 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
VGLL1Q99990 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.15□□□□□ -0.47
VGLL1Q99990 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
VGLL1Q99990 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.47
VGLL1Q99990 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.14□□□□□ -0.47
VGLL1Q99990 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 AL109954.1-202ENST00000564051 2148 ntBASIC12.14□□□□□ -0.47
VGLL1Q99990 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms