Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 AL355864.2-201ENST00000447420 863 ntBASIC16.14■□□□□ 0.17
PHOX2BQ99453 AL591846.1-201ENST00000451736 433 ntBASIC16.14■□□□□ 0.17
PHOX2BQ99453 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 MPDU1-223ENST00000582151 728 ntBASIC16.14■□□□□ 0.17
PHOX2BQ99453 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 AC020914.3-201ENST00000594712 304 ntBASIC16.14■□□□□ 0.17
PHOX2BQ99453 CYP2A7P1-201ENST00000595391 815 ntBASIC16.14■□□□□ 0.17
PHOX2BQ99453 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 MIR6069-201ENST00000620069 79 ntBASIC16.14■□□□□ 0.17
PHOX2BQ99453 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHOX2BQ99453 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.14■□□□□ 0.17
PHOX2BQ99453 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHOX2BQ99453 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHOX2BQ99453 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHOX2BQ99453 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHOX2BQ99453 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHOX2BQ99453 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.13■□□□□ 0.17
PHOX2BQ99453 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHOX2BQ99453 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHOX2BQ99453 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHOX2BQ99453 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHOX2BQ99453 SPDYE17-201ENST00000412399 783 ntBASIC16.13■□□□□ 0.17
PHOX2BQ99453 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 AC016694.1-201ENST00000434179 700 ntBASIC16.13■□□□□ 0.17
PHOX2BQ99453 RN7SL818P-201ENST00000485099 259 ntBASIC16.13■□□□□ 0.17
PHOX2BQ99453 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 AC091804.1-201ENST00000486888 567 ntBASIC16.13■□□□□ 0.17
PHOX2BQ99453 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 AL359711.2-201ENST00000563105 872 ntBASIC16.13■□□□□ 0.17
PHOX2BQ99453 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 RN7SL555P-201ENST00000584742 339 ntBASIC16.13■□□□□ 0.17
PHOX2BQ99453 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.13■□□□□ 0.17
PHOX2BQ99453 RN7SL725P-201ENST00000606439 259 ntBASIC16.13■□□□□ 0.17
PHOX2BQ99453 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHOX2BQ99453 AC018635.2-201ENST00000608625 364 ntBASIC16.13■□□□□ 0.17
PHOX2BQ99453 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.13■□□□□ 0.17
PHOX2BQ99453 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms