Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 AC105250.1-201ENST00000509378 2057 ntBASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 PPT1-215ENST00000641471 2368 ntBASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RHBDF1Q96CC6 AC013268.4-201ENST00000637413 2228 ntBASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 PHKG1P2-201ENST00000457537 863 ntBASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 AC023141.5-201ENST00000458585 616 ntBASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.53■□□□□ 0.08
RHBDF1Q96CC6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 AC254562.1-201ENST00000417586 456 ntBASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RHBDF1Q96CC6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.52■□□□□ 0.07
RHBDF1Q96CC6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RHBDF1Q96CC6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.52■□□□□ 0.07
RHBDF1Q96CC6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RHBDF1Q96CC6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.52■□□□□ 0.07
RHBDF1Q96CC6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RHBDF1Q96CC6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RHBDF1Q96CC6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RHBDF1Q96CC6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RHBDF1Q96CC6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms