Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 EEF1DP4-201ENST00000446006 880 ntBASIC14.35□□□□□ -0.11
CPNE4Q96A23 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 RN7SL618P-201ENST00000477850 296 ntBASIC14.35□□□□□ -0.11
CPNE4Q96A23 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 AC087499.5-201ENST00000452760 1342 ntBASIC14.35□□□□□ -0.11
CPNE4Q96A23 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 AC008741.2-201ENST00000612792 3115 ntBASIC14.34□□□□□ -0.11
CPNE4Q96A23 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 AC134407.2-201ENST00000625089 1978 ntBASIC14.34□□□□□ -0.11
CPNE4Q96A23 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 BNIP3P1-202ENST00000550043 1585 ntBASIC14.34□□□□□ -0.11
CPNE4Q96A23 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE4Q96A23 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE4Q96A23 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE4Q96A23 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.33□□□□□ -0.11
CPNE4Q96A23 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE4Q96A23 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.33□□□□□ -0.11
CPNE4Q96A23 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE4Q96A23 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms