Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 AL844908.2-201ENST00000609461 460 ntBASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 AC022188.1-201ENST00000620960 1664 ntBASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 FER1L4-210ENST00000615531 5998 ntBASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.29■□□□□ 0.2
GRIN3AQ8TCU5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 AC087499.5-201ENST00000452760 1342 ntBASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 TERF1P3-201ENST00000505638 1227 ntBASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 AL512361.1-201ENST00000554200 418 ntBASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 AC138761.1-201ENST00000584393 385 ntBASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 LINC02560-201ENST00000596379 459 ntBASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 CYP4F24P-201ENST00000586049 1580 ntBASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GRIN3AQ8TCU5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms