Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 MIR3652-201ENST00000579335 131 ntBASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB3IL1Q8TBN0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 AP001282.1-201ENST00000531301 1499 ntBASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 AC026396.1-201ENST00000419388 421 ntBASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 LAGE3P1-201ENST00000425356 484 ntBASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 AC093724.1-201ENST00000448659 1027 ntBASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 SART3-203ENST00000546611 1184 ntBASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 AC138894.3-201ENST00000603787 634 ntBASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RAB3IL1Q8TBN0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 TCAF2P1-201ENST00000291129 2421 ntBASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 RNU1-129P-201ENST00000384064 167 ntBASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 PMS2P4-201ENST00000412466 1052 ntBASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 PRELID1P1-202ENST00000567272 903 ntBASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 U1.21-201ENST00000580816 167 ntBASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms