Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC38A9Q8NBW4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC38A9Q8NBW4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 AL596087.1-201ENST00000400979 1969 ntBASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 AC007274.1-201ENST00000439805 662 ntBASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 KRT17P8-201ENST00000540749 863 ntBASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 AC036164.1-201ENST00000570544 333 ntBASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 AL607033.1-201ENST00000623900 1599 ntBASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SLC38A9Q8NBW4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.96□□□□□ -0.02
SLC38A9Q8NBW4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SLC38A9Q8NBW4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
SLC38A9Q8NBW4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC38A9Q8NBW4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC38A9Q8NBW4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SLC38A9Q8NBW4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.96□□□□□ -0.02
SLC38A9Q8NBW4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC38A9Q8NBW4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 AC106886.1-201ENST00000568660 600 ntBASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 AC018695.7-201ENST00000624587 2492 ntBASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC38A9Q8NBW4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC38A9Q8NBW4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC38A9Q8NBW4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms