Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC134407.2-201ENST00000625089 1978 ntBASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 AC211486.1-202ENST00000416371 468 ntBASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 AL627223.1-201ENST00000416693 442 ntBASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 KRT18P32-201ENST00000424695 1287 ntBASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 AC211476.1-201ENST00000503899 468 ntBASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 ALG1L8P-201ENST00000533887 760 ntBASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 AC092865.5-201ENST00000545435 363 ntBASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TTC9CQ8N5M4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TTC9CQ8N5M4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.65□□□□□ -0.39
TTC9CQ8N5M4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
TTC9CQ8N5M4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.65□□□□□ -0.39
TTC9CQ8N5M4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.65□□□□□ -0.39
TTC9CQ8N5M4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms