Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB42Q8N4Z0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB42Q8N4Z0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB42Q8N4Z0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB42Q8N4Z0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB42Q8N4Z0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 BNIP3P1-202ENST00000550043 1585 ntBASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 RFPL4AP1-201ENST00000530883 850 ntBASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 AC093512.1-201ENST00000617969 520 ntBASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB42Q8N4Z0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 TREML5P-201ENST00000421694 576 ntBASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 AL450472.2-201ENST00000603663 1156 ntBASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 SPDYE12P-201ENST00000618416 771 ntBASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 AL603832.2-201ENST00000566195 2125 ntBASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB42Q8N4Z0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 AL161772.1-201ENST00000610494 4412 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms