Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.65■□□□□ 0.74
SYNE4Q8N205 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.65■□□□□ 0.74
SYNE4Q8N205 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.65■□□□□ 0.74
SYNE4Q8N205 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.65■□□□□ 0.74
SYNE4Q8N205 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.65■□□□□ 0.74
SYNE4Q8N205 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SYNE4Q8N205 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SYNE4Q8N205 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SYNE4Q8N205 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SYNE4Q8N205 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.65■□□□□ 0.74
SYNE4Q8N205 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNE4Q8N205 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
SYNE4Q8N205 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYNE4Q8N205 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
SYNE4Q8N205 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 BAATP1-201ENST00000412284 1225 ntBASIC19.64■□□□□ 0.73
SYNE4Q8N205 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 AC099548.2-209ENST00000480264 625 ntBASIC19.64■□□□□ 0.73
SYNE4Q8N205 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 PTP4A1P2-201ENST00000546033 454 ntBASIC19.64■□□□□ 0.73
SYNE4Q8N205 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.64■□□□□ 0.73
SYNE4Q8N205 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNE4Q8N205 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNE4Q8N205 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 AC134312.5-201ENST00000568031 1313 ntBASIC19.63■□□□□ 0.73
SYNE4Q8N205 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 AC007551.1-201ENST00000457394 519 ntBASIC19.63■□□□□ 0.73
SYNE4Q8N205 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNE4Q8N205 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
SYNE4Q8N205 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNE4Q8N205 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SYNE4Q8N205 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SYNE4Q8N205 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNE4Q8N205 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNE4Q8N205 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNE4Q8N205 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNE4Q8N205 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNE4Q8N205 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNE4Q8N205 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms