Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 AC026979.3-201ENST00000607315 403 ntBASIC15.08■□□□□ 0
CCDC116Q8IYX3 AC003101.2-201ENST00000612557 442 ntBASIC15.08■□□□□ 0
CCDC116Q8IYX3 AC009093.7-201ENST00000623853 1223 ntBASIC15.08■□□□□ 0
CCDC116Q8IYX3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 CYP4F24P-201ENST00000586049 1580 ntBASIC15.07■□□□□ 0
CCDC116Q8IYX3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 CICP13-201ENST00000422015 2789 ntBASIC15.07■□□□□ 0
CCDC116Q8IYX3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 MIR1233-2-201ENST00000408138 82 ntBASIC15.07■□□□□ 0
CCDC116Q8IYX3 MIR1233-1-201ENST00000408722 82 ntBASIC15.07■□□□□ 0
CCDC116Q8IYX3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 AL353705.2-201ENST00000428243 662 ntBASIC15.07■□□□□ 0
CCDC116Q8IYX3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 SPDYE14P-201ENST00000442619 822 ntBASIC15.07■□□□□ 0
CCDC116Q8IYX3 DNAJB3-202ENST00000449667 1266 ntBASIC15.07■□□□□ 0
CCDC116Q8IYX3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CCDC116Q8IYX3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC116Q8IYX3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 PKD1P5-201ENST00000532415 10291 ntBASIC15.06■□□□□ 0
CCDC116Q8IYX3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 REXO1L1P-202ENST00000608646 1974 ntBASIC15.06■□□□□ 0
CCDC116Q8IYX3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 HCG24-202ENST00000414398 717 ntTSL 3 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC15.06■□□□□ 0
CCDC116Q8IYX3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 CFTRP2-201ENST00000634304 199 ntBASIC15.06■□□□□ 0
CCDC116Q8IYX3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.06■□□□□ 0
CCDC116Q8IYX3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 AC063926.3-201ENST00000624734 5658 ntBASIC15.06■□□□□ 0
CCDC116Q8IYX3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.06■□□□□ 0
CCDC116Q8IYX3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms