Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 C8orf49-201ENST00000525043 1968 ntBASIC14.48□□□□□ -0.09
SHFQ7M4L6 AC004870.1-201ENST00000315132 882 ntBASIC14.48□□□□□ -0.09
SHFQ7M4L6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 AL773604.1-201ENST00000617417 272 ntBASIC14.48□□□□□ -0.09
SHFQ7M4L6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 MIR600HG-201ENST00000449175 5984 ntBASIC14.48□□□□□ -0.09
SHFQ7M4L6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 AC105250.1-201ENST00000509378 2057 ntBASIC14.47□□□□□ -0.09
SHFQ7M4L6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 CRYGEP-201ENST00000412192 528 ntBASIC14.47□□□□□ -0.09
SHFQ7M4L6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 VN2R19P-201ENST00000442399 1052 ntBASIC14.47□□□□□ -0.09
SHFQ7M4L6 FAAHP1-202ENST00000446499 1238 ntBASIC14.47□□□□□ -0.09
SHFQ7M4L6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 AC093909.1-201ENST00000504731 1122 ntBASIC14.47□□□□□ -0.09
SHFQ7M4L6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.47□□□□□ -0.09
SHFQ7M4L6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 PCDHA3-202ENST00000532566 4594 ntBASIC14.47□□□□□ -0.09
SHFQ7M4L6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 AC023908.3-201ENST00000564211 3047 ntBASIC14.47□□□□□ -0.09
SHFQ7M4L6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHFQ7M4L6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.46□□□□□ -0.09
SHFQ7M4L6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHFQ7M4L6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms