Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 MIR6805-201ENST00000615055 62 ntBASIC19.97■□□□□ 0.79
COPS6Q7L5N1 MIR6775-201ENST00000617557 69 ntBASIC19.97■□□□□ 0.79
COPS6Q7L5N1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS6Q7L5N1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 KRT18P43-201ENST00000469825 1281 ntBASIC19.96■□□□□ 0.79
COPS6Q7L5N1 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 AC120045.2-201ENST00000567334 178 ntBASIC19.96■□□□□ 0.79
COPS6Q7L5N1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.96■□□□□ 0.79
COPS6Q7L5N1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS6Q7L5N1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 LINC02447-202ENST00000501888 2146 ntBASIC19.95■□□□□ 0.78
COPS6Q7L5N1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 TDH-203ENST00000531764 1110 ntBASIC19.95■□□□□ 0.78
COPS6Q7L5N1 ENPP7P5-201ENST00000541031 1031 ntBASIC19.95■□□□□ 0.78
COPS6Q7L5N1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 AC018665.1-201ENST00000622927 1362 ntBASIC19.95■□□□□ 0.78
COPS6Q7L5N1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPS6Q7L5N1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
COPS6Q7L5N1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COPS6Q7L5N1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
COPS6Q7L5N1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.94■□□□□ 0.78
COPS6Q7L5N1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.94■□□□□ 0.78
COPS6Q7L5N1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPS6Q7L5N1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.94■□□□□ 0.78
COPS6Q7L5N1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
COPS6Q7L5N1 ANKRD19P-201ENST00000338192 862 ntBASIC19.94■□□□□ 0.78
COPS6Q7L5N1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPS6Q7L5N1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COPS6Q7L5N1 C1QBPP1-201ENST00000400117 770 ntBASIC19.94■□□□□ 0.78
COPS6Q7L5N1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.94■□□□□ 0.78
COPS6Q7L5N1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms