Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP50Q70EL3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP50Q70EL3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.46■□□□□ 0.55
USP50Q70EL3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
USP50Q70EL3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.46■□□□□ 0.55
USP50Q70EL3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.46■□□□□ 0.55
USP50Q70EL3 LRRC59-203ENST00000576448 1531 ntBASIC18.46■□□□□ 0.55
USP50Q70EL3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
USP50Q70EL3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 DPM3-202ENST00000368399 517 ntBASIC18.46■□□□□ 0.55
USP50Q70EL3 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
USP50Q70EL3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.46■□□□□ 0.55
USP50Q70EL3 AL354877.1-201ENST00000424412 413 ntBASIC18.46■□□□□ 0.55
USP50Q70EL3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.46■□□□□ 0.55
USP50Q70EL3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.46■□□□□ 0.55
USP50Q70EL3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.46■□□□□ 0.55
USP50Q70EL3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.46■□□□□ 0.55
USP50Q70EL3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.46■□□□□ 0.55
USP50Q70EL3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.46■□□□□ 0.55
USP50Q70EL3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.46■□□□□ 0.55
USP50Q70EL3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
USP50Q70EL3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.46■□□□□ 0.55
USP50Q70EL3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.46■□□□□ 0.55
USP50Q70EL3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.46■□□□□ 0.55
USP50Q70EL3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.46■□□□□ 0.55
USP50Q70EL3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.46■□□□□ 0.55
USP50Q70EL3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.46■□□□□ 0.55
USP50Q70EL3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.46■□□□□ 0.55
USP50Q70EL3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.46■□□□□ 0.55
USP50Q70EL3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP50Q70EL3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.46■□□□□ 0.54
USP50Q70EL3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
USP50Q70EL3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.45■□□□□ 0.54
USP50Q70EL3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.45■□□□□ 0.54
USP50Q70EL3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.45■□□□□ 0.54
USP50Q70EL3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.45■□□□□ 0.54
USP50Q70EL3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.45■□□□□ 0.54
USP50Q70EL3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.45■□□□□ 0.54
USP50Q70EL3 AC114501.1-201ENST00000445949 172 ntBASIC18.45■□□□□ 0.54
USP50Q70EL3 AC012618.1-201ENST00000461223 412 ntBASIC18.45■□□□□ 0.54
USP50Q70EL3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.45■□□□□ 0.54
USP50Q70EL3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.45■□□□□ 0.54
USP50Q70EL3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.45■□□□□ 0.54
USP50Q70EL3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.45■□□□□ 0.54
USP50Q70EL3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.45■□□□□ 0.54
USP50Q70EL3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.45■□□□□ 0.54
USP50Q70EL3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 AC022748.3-201ENST00000621828 275 ntBASIC18.45■□□□□ 0.54
USP50Q70EL3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
USP50Q70EL3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
USP50Q70EL3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
USP50Q70EL3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
USP50Q70EL3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.45■□□□□ 0.54
USP50Q70EL3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP50Q70EL3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP50Q70EL3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.44■□□□□ 0.54
USP50Q70EL3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.44■□□□□ 0.54
USP50Q70EL3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.44■□□□□ 0.54
USP50Q70EL3 KRT8P29-201ENST00000420409 1371 ntBASIC18.44■□□□□ 0.54
USP50Q70EL3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.44■□□□□ 0.54
USP50Q70EL3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
USP50Q70EL3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP50Q70EL3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.44■□□□□ 0.54
USP50Q70EL3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.44■□□□□ 0.54
USP50Q70EL3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP50Q70EL3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.44■□□□□ 0.54
USP50Q70EL3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.44■□□□□ 0.54
USP50Q70EL3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP50Q70EL3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP50Q70EL3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP50Q70EL3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.44■□□□□ 0.54
USP50Q70EL3 ACTG1P2-201ENST00000415776 1125 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms