Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 PCDHA12-202ENST00000613593 2588 ntBASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 AC099336.1-201ENST00000417053 1171 ntBASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 FAM21FP-201ENST00000426241 1131 ntBASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 AC134915.1-201ENST00000426461 574 ntBASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 REXO1L1P-202ENST00000608646 1974 ntBASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 AC136604.1-201ENST00000418535 575 ntBASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 RNA5SP412-201ENST00000516234 123 ntBASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC149Q6ZUS6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 AC134407.2-201ENST00000625089 1978 ntBASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 SOCS2P1-201ENST00000417727 557 ntBASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 BCYRN1-201ENST00000418539 200 ntBASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 FO681548.1-201ENST00000455617 1132 ntBASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 AL359711.2-201ENST00000563105 872 ntBASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms