Protein–RNA interactions for Protein: Q6UXH8

CCBE1, Collagen and calcium-binding EGF domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1Q6UXH8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.28□□□□□ -0.12
CCBE1Q6UXH8 AL135999.2-201ENST00000622438 1686 ntBASIC14.28□□□□□ -0.12
CCBE1Q6UXH8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCBE1Q6UXH8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCBE1Q6UXH8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCBE1Q6UXH8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCBE1Q6UXH8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCBE1Q6UXH8 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCBE1Q6UXH8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCBE1Q6UXH8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCBE1Q6UXH8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCBE1Q6UXH8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 FAAHP1-202ENST00000446499 1238 ntBASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 DUX4L17-201ENST00000557360 1267 ntBASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 GPALPP1-207ENST00000611650 899 ntBASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCBE1Q6UXH8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 REXO1L2P-201ENST00000425429 2069 ntBASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 AGAP7P-201ENST00000582299 2062 ntBASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 AGAP14-201ENST00000624701 2060 ntBASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 INTS4P1-201ENST00000438455 1935 ntBASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 MIR648-201ENST00000385046 94 ntBASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 AC132008.2-207ENST00000454517 770 ntBASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 AC011467.2-201ENST00000598425 242 ntBASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 AC104692.2-201ENST00000603054 253 ntBASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 AL031008.1-201ENST00000619963 541 ntBASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 REXO1L6P-202ENST00000619970 1078 ntBASIC14.26□□□□□ -0.13
CCBE1Q6UXH8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms