Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 MIR3652-201ENST00000579335 131 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 AL356488.2-201ENST00000602755 427 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 AC004790.2-201ENST00000623588 572 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 AL365209.1-201ENST00000624418 6473 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AL589702.1-201ENST00000641229 1509 ntBASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AKR1C7P-201ENST00000305623 895 ntBASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AL513480.1-201ENST00000451731 511 ntBASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AC108073.2-201ENST00000464002 357 ntBASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AC008735.5-201ENST00000623544 497 ntBASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AC005593.1-201ENST00000624894 515 ntBASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 AC126365.1-201ENST00000578585 1514 ntBASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00242Q5T6M2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 AC005089.1-201ENST00000619486 2241 ntBASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 KRT8P44-201ENST00000441609 1350 ntBASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms