Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 ZNF767P-206ENST00000513792 565 ntBASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 AC018892.3-201ENST00000623986 2499 ntBASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 CNN2P8-201ENST00000421872 913 ntBASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 RPL13AP20-201ENST00000459725 609 ntBASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 GAPDHP40-201ENST00000505218 1006 ntBASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 AC079316.1-201ENST00000548397 411 ntBASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 DUX4L45-201ENST00000566406 1057 ntBASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 AC107373.2-201ENST00000607735 490 ntBASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 AC244093.1-201ENST00000610837 814 ntBASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 AC009542.2-202ENST00000619004 1067 ntBASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM71Q2Q1W2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 AC012313.1-201ENST00000593393 3059 ntBASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 YBX1P6-201ENST00000442962 1002 ntBASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 AC093813.1-201ENST00000605066 256 ntBASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 AC008687.7-202ENST00000637404 953 ntBASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM71Q2Q1W2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms