Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.66■□□□□ 0.74
R3HDM1Q15032 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
R3HDM1Q15032 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HDM1Q15032 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.66■□□□□ 0.74
R3HDM1Q15032 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.66■□□□□ 0.74
R3HDM1Q15032 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.66■□□□□ 0.74
R3HDM1Q15032 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
R3HDM1Q15032 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.66■□□□□ 0.74
R3HDM1Q15032 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HDM1Q15032 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.66■□□□□ 0.74
R3HDM1Q15032 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC19.66■□□□□ 0.74
R3HDM1Q15032 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
R3HDM1Q15032 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 AC026410.1-201ENST00000507366 1101 ntBASIC19.65■□□□□ 0.74
R3HDM1Q15032 ALG1L6P-201ENST00000515248 758 ntBASIC19.65■□□□□ 0.74
R3HDM1Q15032 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 RPL17P45-201ENST00000586289 509 ntBASIC19.65■□□□□ 0.74
R3HDM1Q15032 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.65■□□□□ 0.74
R3HDM1Q15032 NAP1L6-202ENST00000641404 1222 ntBASIC19.65■□□□□ 0.74
R3HDM1Q15032 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM1Q15032 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.65■□□□□ 0.74
R3HDM1Q15032 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
R3HDM1Q15032 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
R3HDM1Q15032 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
R3HDM1Q15032 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.64■□□□□ 0.74
R3HDM1Q15032 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
R3HDM1Q15032 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
R3HDM1Q15032 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.64■□□□□ 0.73
R3HDM1Q15032 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
R3HDM1Q15032 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM1Q15032 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM1Q15032 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM1Q15032 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM1Q15032 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC19.64■□□□□ 0.73
R3HDM1Q15032 TUBB8P8-201ENST00000458717 1058 ntBASIC19.64■□□□□ 0.73
R3HDM1Q15032 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.64■□□□□ 0.73
R3HDM1Q15032 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC19.64■□□□□ 0.73
R3HDM1Q15032 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.64■□□□□ 0.73
R3HDM1Q15032 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM1Q15032 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
R3HDM1Q15032 LRRC59-203ENST00000576448 1531 ntBASIC19.64■□□□□ 0.73
R3HDM1Q15032 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
R3HDM1Q15032 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM1Q15032 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
R3HDM1Q15032 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM1Q15032 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.64■□□□□ 0.73
R3HDM1Q15032 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
R3HDM1Q15032 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM1Q15032 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM1Q15032 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM1Q15032 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
R3HDM1Q15032 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
R3HDM1Q15032 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
R3HDM1Q15032 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.63■□□□□ 0.73
R3HDM1Q15032 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
R3HDM1Q15032 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.63■□□□□ 0.73
R3HDM1Q15032 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
R3HDM1Q15032 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
R3HDM1Q15032 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.63■□□□□ 0.73
R3HDM1Q15032 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC19.63■□□□□ 0.73
R3HDM1Q15032 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.63■□□□□ 0.73
R3HDM1Q15032 OR2K2-202ENST00000374428 1038 ntBASIC19.63■□□□□ 0.73
R3HDM1Q15032 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM1Q15032 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms