Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AP001505.2-201ENST00000616815 443 ntBASIC19.24■□□□□ 0.67
CACNA1SQ13698 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 AC092364.2-201ENST00000596710 2692 ntBASIC19.24■□□□□ 0.67
CACNA1SQ13698 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.23■□□□□ 0.67
CACNA1SQ13698 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 PCDHA14-201ENST00000506751 2298 ntBASIC19.23■□□□□ 0.67
CACNA1SQ13698 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1SQ13698 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CACNA1SQ13698 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 RN7SL574P-201ENST00000581512 297 ntBASIC19.22■□□□□ 0.67
CACNA1SQ13698 AC138649.2-201ENST00000615886 705 ntBASIC19.22■□□□□ 0.67
CACNA1SQ13698 AC006453.4-201ENST00000636949 1252 ntBASIC19.22■□□□□ 0.67
CACNA1SQ13698 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 KRT8P35-201ENST00000483942 1338 ntBASIC19.22■□□□□ 0.67
CACNA1SQ13698 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.22■□□□□ 0.67
CACNA1SQ13698 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 AC104457.1-201ENST00000401024 814 ntBASIC19.22■□□□□ 0.67
CACNA1SQ13698 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 IMP3P2-201ENST00000489760 475 ntBASIC19.22■□□□□ 0.67
CACNA1SQ13698 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 AC091812.3-201ENST00000621362 345 ntBASIC19.22■□□□□ 0.67
CACNA1SQ13698 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1SQ13698 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CACNA1SQ13698 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1SQ13698 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1SQ13698 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1SQ13698 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1SQ13698 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1SQ13698 SERPINA13P-202ENST00000478994 924 ntBASIC19.21■□□□□ 0.67
CACNA1SQ13698 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1SQ13698 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1SQ13698 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CACNA1SQ13698 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms