Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDR1Q08345 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDR1Q08345 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
DDR1Q08345 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.51■□□□□ 0.71
DDR1Q08345 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDR1Q08345 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDR1Q08345 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
DDR1Q08345 ACTBP8-201ENST00000403258 1108 ntBASIC19.51■□□□□ 0.71
DDR1Q08345 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
DDR1Q08345 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.51■□□□□ 0.71
DDR1Q08345 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.51■□□□□ 0.71
DDR1Q08345 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDR1Q08345 AC126915.1-201ENST00000522847 1038 ntBASIC19.51■□□□□ 0.71
DDR1Q08345 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDR1Q08345 BX539320.1-201ENST00000623759 877 ntBASIC19.51■□□□□ 0.71
DDR1Q08345 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.51■□□□□ 0.71
DDR1Q08345 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
DDR1Q08345 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.51■□□□□ 0.71
DDR1Q08345 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDR1Q08345 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
DDR1Q08345 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDR1Q08345 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.51■□□□□ 0.71
DDR1Q08345 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.51■□□□□ 0.71
DDR1Q08345 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.51■□□□□ 0.71
DDR1Q08345 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.51■□□□□ 0.71
DDR1Q08345 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDR1Q08345 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.5■□□□□ 0.71
DDR1Q08345 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DDR1Q08345 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
DDR1Q08345 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.5■□□□□ 0.71
DDR1Q08345 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
DDR1Q08345 CYP46A4P-201ENST00000414953 267 ntBASIC19.5■□□□□ 0.71
DDR1Q08345 KLF2P2-201ENST00000416807 1039 ntBASIC19.5■□□□□ 0.71
DDR1Q08345 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.5■□□□□ 0.71
DDR1Q08345 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.5■□□□□ 0.71
DDR1Q08345 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.5■□□□□ 0.71
DDR1Q08345 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
DDR1Q08345 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.5■□□□□ 0.71
DDR1Q08345 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
DDR1Q08345 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.5■□□□□ 0.71
DDR1Q08345 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.5■□□□□ 0.71
DDR1Q08345 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
DDR1Q08345 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.5■□□□□ 0.71
DDR1Q08345 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDR1Q08345 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
DDR1Q08345 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
DDR1Q08345 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDR1Q08345 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDR1Q08345 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDR1Q08345 ALOX12P2-203ENST00000570921 1945 ntBASIC19.49■□□□□ 0.71
DDR1Q08345 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
DDR1Q08345 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
DDR1Q08345 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDR1Q08345 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDR1Q08345 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDR1Q08345 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.49■□□□□ 0.71
DDR1Q08345 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.49■□□□□ 0.71
DDR1Q08345 NKAIN1P1-201ENST00000435754 582 ntBASIC19.49■□□□□ 0.71
DDR1Q08345 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.49■□□□□ 0.71
DDR1Q08345 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.49■□□□□ 0.71
DDR1Q08345 MIR5572-201ENST00000583188 137 ntBASIC19.49■□□□□ 0.71
DDR1Q08345 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.49■□□□□ 0.71
DDR1Q08345 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.49■□□□□ 0.71
DDR1Q08345 AC091812.3-201ENST00000621362 345 ntBASIC19.49■□□□□ 0.71
DDR1Q08345 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.49■□□□□ 0.71
DDR1Q08345 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDR1Q08345 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.49■□□□□ 0.71
DDR1Q08345 AL354989.2-201ENST00000435838 1540 ntBASIC19.49■□□□□ 0.71
DDR1Q08345 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDR1Q08345 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.49■□□□□ 0.71
DDR1Q08345 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDR1Q08345 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDR1Q08345 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDR1Q08345 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDR1Q08345 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDR1Q08345 AC148477.4-201ENST00000613430 1793 ntBASIC19.48■□□□□ 0.71
DDR1Q08345 TNRC18P3-201ENST00000441896 2691 ntBASIC19.48■□□□□ 0.71
DDR1Q08345 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDR1Q08345 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.48■□□□□ 0.71
DDR1Q08345 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.48■□□□□ 0.71
DDR1Q08345 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDR1Q08345 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.48■□□□□ 0.71
DDR1Q08345 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.48■□□□□ 0.71
DDR1Q08345 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms