Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3AP84243 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3AP84243 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3AP84243 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.26□□□□□ -0.13
H3F3AP84243 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.26□□□□□ -0.13
H3F3AP84243 TREML5P-201ENST00000421694 576 ntBASIC14.26□□□□□ -0.13
H3F3AP84243 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3AP84243 AC055876.3-201ENST00000431496 288 ntBASIC14.26□□□□□ -0.13
H3F3AP84243 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3AP84243 AC027369.6-201ENST00000525520 931 ntBASIC14.26□□□□□ -0.13
H3F3AP84243 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.26□□□□□ -0.13
H3F3AP84243 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3AP84243 AC138649.4-201ENST00000612222 287 ntBASIC14.26□□□□□ -0.13
H3F3AP84243 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.26□□□□□ -0.13
H3F3AP84243 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.26□□□□□ -0.13
H3F3AP84243 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H3F3AP84243 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3AP84243 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H3F3AP84243 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3AP84243 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.26□□□□□ -0.13
H3F3AP84243 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.26□□□□□ -0.13
H3F3AP84243 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.26□□□□□ -0.13
H3F3AP84243 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.26□□□□□ -0.13
H3F3AP84243 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3AP84243 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3AP84243 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.26□□□□□ -0.13
H3F3AP84243 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.26□□□□□ -0.13
H3F3AP84243 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3AP84243 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.26□□□□□ -0.13
H3F3AP84243 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
H3F3AP84243 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
H3F3AP84243 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
H3F3AP84243 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.25□□□□□ -0.13
H3F3AP84243 AC007950.2-201ENST00000615045 2347 ntBASIC14.25□□□□□ -0.13
H3F3AP84243 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
H3F3AP84243 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
H3F3AP84243 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.25□□□□□ -0.13
H3F3AP84243 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.25□□□□□ -0.13
H3F3AP84243 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
H3F3AP84243 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 AC087499.5-201ENST00000452760 1342 ntBASIC14.25□□□□□ -0.13
H3F3AP84243 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.25□□□□□ -0.13
H3F3AP84243 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
H3F3AP84243 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.25□□□□□ -0.13
H3F3AP84243 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.25□□□□□ -0.13
H3F3AP84243 AZGP1P1-201ENST00000411909 902 ntBASIC14.25□□□□□ -0.13
H3F3AP84243 AC136604.1-201ENST00000418535 575 ntBASIC14.25□□□□□ -0.13
H3F3AP84243 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
H3F3AP84243 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.25□□□□□ -0.13
H3F3AP84243 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.25□□□□□ -0.13
H3F3AP84243 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H3F3AP84243 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.25□□□□□ -0.13
H3F3AP84243 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 AC093512.1-201ENST00000617969 520 ntBASIC14.25□□□□□ -0.13
H3F3AP84243 MIR6069-201ENST00000620069 79 ntBASIC14.25□□□□□ -0.13
H3F3AP84243 AL590560.3-201ENST00000623350 461 ntBASIC14.25□□□□□ -0.13
H3F3AP84243 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.25□□□□□ -0.13
H3F3AP84243 AL033527.5-202ENST00000641632 1098 ntBASIC14.25□□□□□ -0.13
H3F3AP84243 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
H3F3AP84243 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
H3F3AP84243 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
H3F3AP84243 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.25□□□□□ -0.13
H3F3AP84243 TSPY26P-202ENST00000565928 3884 ntBASIC14.25□□□□□ -0.13
H3F3AP84243 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.25□□□□□ -0.13
H3F3AP84243 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H3F3AP84243 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.25□□□□□ -0.13
H3F3AP84243 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3AP84243 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.25□□□□□ -0.13
H3F3AP84243 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3AP84243 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
H3F3AP84243 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.24□□□□□ -0.13
H3F3AP84243 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.24□□□□□ -0.13
H3F3AP84243 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3AP84243 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.24□□□□□ -0.13
H3F3AP84243 SERBP1P3-201ENST00000459980 809 ntBASIC14.24□□□□□ -0.13
H3F3AP84243 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3AP84243 CYMP-203ENST00000474680 1263 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms