Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
UBE2NP61088 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
UBE2NP61088 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UBE2NP61088 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
UBE2NP61088 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UBE2NP61088 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 AL691432.1-201ENST00000596308 1422 ntBASIC14.07□□□□□ -0.16
UBE2NP61088 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
UBE2NP61088 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.06□□□□□ -0.16
UBE2NP61088 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 PCDH8P1-201ENST00000428983 2773 ntBASIC14.06□□□□□ -0.16
UBE2NP61088 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
UBE2NP61088 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.06□□□□□ -0.16
UBE2NP61088 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
UBE2NP61088 CYP2T1P-202ENST00000641596 2535 ntBASIC14.06□□□□□ -0.16
UBE2NP61088 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.06□□□□□ -0.16
UBE2NP61088 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.06□□□□□ -0.16
UBE2NP61088 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
UBE2NP61088 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBE2NP61088 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.06□□□□□ -0.16
UBE2NP61088 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.06□□□□□ -0.16
UBE2NP61088 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.06□□□□□ -0.16
UBE2NP61088 AC241585.1-201ENST00000433527 519 ntBASIC14.06□□□□□ -0.16
UBE2NP61088 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.06□□□□□ -0.16
UBE2NP61088 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.06□□□□□ -0.16
UBE2NP61088 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.06□□□□□ -0.16
UBE2NP61088 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.06□□□□□ -0.16
UBE2NP61088 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBE2NP61088 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.06□□□□□ -0.16
UBE2NP61088 AL133215.2-201ENST00000609242 977 ntBASIC14.06□□□□□ -0.16
UBE2NP61088 AL138828.2-201ENST00000615812 383 ntBASIC14.06□□□□□ -0.16
UBE2NP61088 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.06□□□□□ -0.16
UBE2NP61088 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
UBE2NP61088 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
UBE2NP61088 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.06□□□□□ -0.16
UBE2NP61088 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2NP61088 AC103702.1-201ENST00000548801 2630 ntBASIC14.06□□□□□ -0.16
UBE2NP61088 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
UBE2NP61088 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.06□□□□□ -0.16
UBE2NP61088 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.06□□□□□ -0.16
UBE2NP61088 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UBE2NP61088 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.05□□□□□ -0.16
UBE2NP61088 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
UBE2NP61088 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.05□□□□□ -0.16
UBE2NP61088 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UBE2NP61088 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
UBE2NP61088 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.05□□□□□ -0.16
UBE2NP61088 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UBE2NP61088 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.05□□□□□ -0.16
UBE2NP61088 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.05□□□□□ -0.16
UBE2NP61088 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.05□□□□□ -0.16
UBE2NP61088 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.05□□□□□ -0.16
UBE2NP61088 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.05□□□□□ -0.16
UBE2NP61088 INGX-202ENST00000489074 768 ntBASIC14.05□□□□□ -0.16
UBE2NP61088 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.05□□□□□ -0.16
UBE2NP61088 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.05□□□□□ -0.16
UBE2NP61088 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.05□□□□□ -0.16
UBE2NP61088 AC005498.2-205ENST00000593218 784 ntBASIC14.05□□□□□ -0.16
UBE2NP61088 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.05□□□□□ -0.16
UBE2NP61088 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2NP61088 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms