Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LINC02199-201ENST00000506655 2702 ntBASIC14.41□□□□□ -0.1
SUMO3P55854 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.41□□□□□ -0.1
SUMO3P55854 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.4□□□□□ -0.1
SUMO3P55854 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.4□□□□□ -0.1
SUMO3P55854 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.4□□□□□ -0.1
SUMO3P55854 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SUMO3P55854 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 AL607033.1-201ENST00000623900 1599 ntBASIC14.4□□□□□ -0.1
SUMO3P55854 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SUMO3P55854 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.4□□□□□ -0.1
SUMO3P55854 BASP1P1-201ENST00000430708 665 ntBASIC14.4□□□□□ -0.1
SUMO3P55854 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 CYMP-203ENST00000474680 1263 ntBASIC14.4□□□□□ -0.1
SUMO3P55854 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.4□□□□□ -0.1
SUMO3P55854 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 SLED1-202ENST00000512051 380 ntBASIC14.4□□□□□ -0.1
SUMO3P55854 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.4□□□□□ -0.1
SUMO3P55854 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.4□□□□□ -0.1
SUMO3P55854 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.4□□□□□ -0.1
SUMO3P55854 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.4□□□□□ -0.1
SUMO3P55854 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.4□□□□□ -0.1
SUMO3P55854 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.4□□□□□ -0.1
SUMO3P55854 AL844908.2-201ENST00000609461 460 ntBASIC14.4□□□□□ -0.1
SUMO3P55854 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.4□□□□□ -0.1
SUMO3P55854 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.4□□□□□ -0.1
SUMO3P55854 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SUMO3P55854 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.39□□□□□ -0.11
SUMO3P55854 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.39□□□□□ -0.11
SUMO3P55854 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.39□□□□□ -0.11
SUMO3P55854 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 BTBD7P1-201ENST00000447253 1453 ntBASIC14.39□□□□□ -0.11
SUMO3P55854 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.39□□□□□ -0.11
SUMO3P55854 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SUMO3P55854 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SUMO3P55854 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.39□□□□□ -0.11
SUMO3P55854 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.39□□□□□ -0.11
SUMO3P55854 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SUMO3P55854 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.39□□□□□ -0.11
SUMO3P55854 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.39□□□□□ -0.11
SUMO3P55854 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.39□□□□□ -0.11
SUMO3P55854 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.39□□□□□ -0.11
SUMO3P55854 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.39□□□□□ -0.11
SUMO3P55854 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.39□□□□□ -0.11
SUMO3P55854 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.39□□□□□ -0.11
SUMO3P55854 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.39□□□□□ -0.11
SUMO3P55854 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.39□□□□□ -0.11
SUMO3P55854 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.39□□□□□ -0.11
SUMO3P55854 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.39□□□□□ -0.11
SUMO3P55854 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.39□□□□□ -0.11
SUMO3P55854 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.39□□□□□ -0.11
SUMO3P55854 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
SUMO3P55854 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.39□□□□□ -0.11
SUMO3P55854 AL390754.1-201ENST00000619088 582 ntBASIC14.39□□□□□ -0.11
SUMO3P55854 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SUMO3P55854 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms