Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PDX1P52945 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.48■□□□□ 0.07
PDX1P52945 MEP1AP4-201ENST00000423244 1087 ntBASIC15.48■□□□□ 0.07
PDX1P52945 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.48■□□□□ 0.07
PDX1P52945 HIST3H2BA-201ENST00000436555 524 ntBASIC15.48■□□□□ 0.07
PDX1P52945 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.48■□□□□ 0.07
PDX1P52945 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.48■□□□□ 0.07
PDX1P52945 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.48■□□□□ 0.07
PDX1P52945 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.48■□□□□ 0.07
PDX1P52945 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PDX1P52945 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PDX1P52945 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PDX1P52945 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.48■□□□□ 0.07
PDX1P52945 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.48■□□□□ 0.07
PDX1P52945 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.48■□□□□ 0.07
PDX1P52945 AC025048.3-201ENST00000590609 569 ntBASIC15.48■□□□□ 0.07
PDX1P52945 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.48■□□□□ 0.07
PDX1P52945 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.48■□□□□ 0.07
PDX1P52945 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 AC093726.1-201ENST00000608064 963 ntBASIC15.48■□□□□ 0.07
PDX1P52945 MIR6805-201ENST00000615055 62 ntBASIC15.48■□□□□ 0.07
PDX1P52945 AC005702.4-201ENST00000618393 416 ntBASIC15.48■□□□□ 0.07
PDX1P52945 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.48■□□□□ 0.07
PDX1P52945 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.48■□□□□ 0.07
PDX1P52945 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PDX1P52945 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.48■□□□□ 0.07
PDX1P52945 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
PDX1P52945 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.48■□□□□ 0.07
PDX1P52945 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
PDX1P52945 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PDX1P52945 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PDX1P52945 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PDX1P52945 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.47■□□□□ 0.07
PDX1P52945 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PDX1P52945 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PDX1P52945 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PDX1P52945 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.47■□□□□ 0.07
PDX1P52945 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.47■□□□□ 0.07
PDX1P52945 AL136982.4-201ENST00000437689 1740 ntBASIC15.47■□□□□ 0.07
PDX1P52945 RPS2P32-201ENST00000439199 892 ntBASIC15.47■□□□□ 0.07
PDX1P52945 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PDX1P52945 AC022210.1-201ENST00000449856 793 ntBASIC15.47■□□□□ 0.07
PDX1P52945 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.47■□□□□ 0.07
PDX1P52945 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
PDX1P52945 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
PDX1P52945 RAB43P1-201ENST00000561790 589 ntBASIC15.47■□□□□ 0.07
PDX1P52945 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.47■□□□□ 0.07
PDX1P52945 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.47■□□□□ 0.07
PDX1P52945 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.47■□□□□ 0.07
PDX1P52945 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDX1P52945 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PDX1P52945 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms