Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF140P52738 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF140P52738 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF140P52738 SSR4P1-203ENST00000599569 2260 ntBASIC15.82■□□□□ 0.12
ZNF140P52738 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF140P52738 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
ZNF140P52738 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF140P52738 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF140P52738 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.81■□□□□ 0.12
ZNF140P52738 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF140P52738 MIR943-201ENST00000401286 94 ntBASIC15.81■□□□□ 0.12
ZNF140P52738 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.81■□□□□ 0.12
ZNF140P52738 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF140P52738 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF140P52738 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ZNF140P52738 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 AC027369.6-201ENST00000525520 931 ntBASIC15.81■□□□□ 0.12
ZNF140P52738 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 AL844908.2-201ENST00000609461 460 ntBASIC15.81■□□□□ 0.12
ZNF140P52738 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ZNF140P52738 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.81■□□□□ 0.12
ZNF140P52738 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF140P52738 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF140P52738 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
ZNF140P52738 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF140P52738 AC092384.3-202ENST00000564646 2873 ntBASIC15.81■□□□□ 0.12
ZNF140P52738 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ZNF140P52738 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 AC136621.1-201ENST00000624017 2304 ntBASIC15.8■□□□□ 0.12
ZNF140P52738 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF140P52738 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 AC100757.3-201ENST00000622361 1406 ntBASIC15.8■□□□□ 0.12
ZNF140P52738 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF140P52738 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ZNF140P52738 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF140P52738 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.8■□□□□ 0.12
ZNF140P52738 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF140P52738 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF140P52738 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF140P52738 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF140P52738 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF140P52738 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
ZNF140P52738 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF140P52738 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
ZNF140P52738 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF140P52738 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms