Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN2P51788 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.52■□□□□ 0.07
CLCN2P51788 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN2P51788 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN2P51788 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCN2P51788 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN2P51788 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN2P51788 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
CLCN2P51788 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
CLCN2P51788 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CLCN2P51788 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.52■□□□□ 0.07
CLCN2P51788 GPAA1P2-202ENST00000606848 1787 ntBASIC15.52■□□□□ 0.07
CLCN2P51788 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCN2P51788 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCN2P51788 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLCN2P51788 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN2P51788 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN2P51788 AKAP8P1-201ENST00000434743 1349 ntBASIC15.51■□□□□ 0.07
CLCN2P51788 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 PCGF3-213ENST00000620529 1899 ntBASIC15.51■□□□□ 0.07
CLCN2P51788 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN2P51788 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.51■□□□□ 0.07
CLCN2P51788 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 RN7SL589P-201ENST00000481268 310 ntBASIC15.51■□□□□ 0.07
CLCN2P51788 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.51■□□□□ 0.07
CLCN2P51788 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCN2P51788 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CLCN2P51788 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.51■□□□□ 0.07
CLCN2P51788 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCN2P51788 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCN2P51788 SNX18-202ENST00000343017 3140 ntBASIC15.51■□□□□ 0.07
CLCN2P51788 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLCN2P51788 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 LINC01144-201ENST00000626198 1710 ntBASIC15.51■□□□□ 0.07
CLCN2P51788 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN2P51788 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN2P51788 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.5■□□□□ 0.07
CLCN2P51788 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCN2P51788 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN2P51788 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN2P51788 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN2P51788 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLCN2P51788 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 TFAMP1-201ENST00000412727 736 ntBASIC15.5■□□□□ 0.07
CLCN2P51788 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLCN2P51788 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.5■□□□□ 0.07
CLCN2P51788 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 TIMM8BP1-201ENST00000452384 211 ntBASIC15.5■□□□□ 0.07
CLCN2P51788 POU5F1P6-201ENST00000466990 990 ntBASIC15.5■□□□□ 0.07
CLCN2P51788 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.5■□□□□ 0.07
CLCN2P51788 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CLCN2P51788 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN2P51788 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
CLCN2P51788 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN2P51788 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CLCN2P51788 AC105339.1-204ENST00000636249 355 ntBASIC15.5■□□□□ 0.07
CLCN2P51788 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN2P51788 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
CLCN2P51788 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN2P51788 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CLCN2P51788 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN2P51788 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms