Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 BNIP3P1-202ENST00000550043 1585 ntBASIC14.23□□□□□ -0.13
CSNK1A1P48729 CYP4F24P-201ENST00000586049 1580 ntBASIC14.23□□□□□ -0.13
CSNK1A1P48729 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 AC027612.4-201ENST00000605371 583 ntBASIC14.23□□□□□ -0.13
CSNK1A1P48729 AP001059.3-201ENST00000619053 235 ntBASIC14.23□□□□□ -0.13
CSNK1A1P48729 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 AL136982.4-201ENST00000437689 1740 ntBASIC14.23□□□□□ -0.13
CSNK1A1P48729 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSNK1A1P48729 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.23□□□□□ -0.13
CSNK1A1P48729 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 AC105021.1-202ENST00000570572 669 ntBASIC14.22□□□□□ -0.13
CSNK1A1P48729 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 LINC00628-201ENST00000628516 1289 ntBASIC14.22□□□□□ -0.13
CSNK1A1P48729 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSNK1A1P48729 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CSNK1A1P48729 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 AC132872.4-202ENST00000622924 2756 ntBASIC14.21□□□□□ -0.13
CSNK1A1P48729 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms