Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.88■□□□□ 0.29
BRCC3P46736 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.88■□□□□ 0.29
BRCC3P46736 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.88■□□□□ 0.29
BRCC3P46736 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.88■□□□□ 0.29
BRCC3P46736 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.88■□□□□ 0.29
BRCC3P46736 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BRCC3P46736 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.88■□□□□ 0.29
BRCC3P46736 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
BRCC3P46736 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.88■□□□□ 0.29
BRCC3P46736 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCC3P46736 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCC3P46736 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BRCC3P46736 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.88■□□□□ 0.29
BRCC3P46736 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
BRCC3P46736 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
BRCC3P46736 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.88■□□□□ 0.29
BRCC3P46736 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCC3P46736 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
BRCC3P46736 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.87■□□□□ 0.29
BRCC3P46736 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.87■□□□□ 0.29
BRCC3P46736 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.87■□□□□ 0.29
BRCC3P46736 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
BRCC3P46736 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.87■□□□□ 0.29
BRCC3P46736 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.87■□□□□ 0.29
BRCC3P46736 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
BRCC3P46736 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BRCC3P46736 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
BRCC3P46736 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
BRCC3P46736 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 ATP5G2P4-201ENST00000442175 420 ntBASIC16.87■□□□□ 0.29
BRCC3P46736 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
BRCC3P46736 GPR53P-205ENST00000457298 1084 ntBASIC16.87■□□□□ 0.29
BRCC3P46736 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.87■□□□□ 0.29
BRCC3P46736 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.87■□□□□ 0.29
BRCC3P46736 IGHV3-71-201ENST00000523324 359 ntBASIC16.87■□□□□ 0.29
BRCC3P46736 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.87■□□□□ 0.29
BRCC3P46736 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.87■□□□□ 0.29
BRCC3P46736 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.87■□□□□ 0.29
BRCC3P46736 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.87■□□□□ 0.29
BRCC3P46736 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.87■□□□□ 0.29
BRCC3P46736 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 RPSAP52-203ENST00000622976 1023 ntBASIC16.87■□□□□ 0.29
BRCC3P46736 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.87■□□□□ 0.29
BRCC3P46736 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.87■□□□□ 0.29
BRCC3P46736 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.87■□□□□ 0.29
BRCC3P46736 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BRCC3P46736 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.87■□□□□ 0.29
BRCC3P46736 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCC3P46736 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 AC084018.2-201ENST00000613093 2607 ntBASIC16.86■□□□□ 0.29
BRCC3P46736 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BRCC3P46736 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 AC011477.6-201ENST00000604980 1927 ntBASIC16.86■□□□□ 0.29
BRCC3P46736 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BRCC3P46736 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.86■□□□□ 0.29
BRCC3P46736 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.86■□□□□ 0.29
BRCC3P46736 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.86■□□□□ 0.29
BRCC3P46736 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.86■□□□□ 0.29
BRCC3P46736 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.86■□□□□ 0.29
BRCC3P46736 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.86■□□□□ 0.29
BRCC3P46736 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.86■□□□□ 0.29
BRCC3P46736 AL359711.2-201ENST00000563105 872 ntBASIC16.86■□□□□ 0.29
BRCC3P46736 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.86■□□□□ 0.29
BRCC3P46736 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.86■□□□□ 0.29
BRCC3P46736 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.86■□□□□ 0.29
BRCC3P46736 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
BRCC3P46736 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.86■□□□□ 0.29
BRCC3P46736 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.86■□□□□ 0.29
BRCC3P46736 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.86■□□□□ 0.29
BRCC3P46736 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms