Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 TIMM8BP1-201ENST00000452384 211 ntBASIC16.87■□□□□ 0.29
PCK1P35558 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.87■□□□□ 0.29
PCK1P35558 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.87■□□□□ 0.29
PCK1P35558 IGHV3-62-201ENST00000520057 340 ntBASIC16.87■□□□□ 0.29
PCK1P35558 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.87■□□□□ 0.29
PCK1P35558 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.87■□□□□ 0.29
PCK1P35558 AC005829.1-201ENST00000570002 483 ntBASIC16.87■□□□□ 0.29
PCK1P35558 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.87■□□□□ 0.29
PCK1P35558 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.87■□□□□ 0.29
PCK1P35558 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCK1P35558 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PCK1P35558 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 AL161772.1-201ENST00000610494 4412 ntBASIC16.87■□□□□ 0.29
PCK1P35558 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.87■□□□□ 0.29
PCK1P35558 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.87■□□□□ 0.29
PCK1P35558 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCK1P35558 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
PCK1P35558 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCK1P35558 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.86■□□□□ 0.29
PCK1P35558 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.86■□□□□ 0.29
PCK1P35558 YBX1P5-201ENST00000509441 847 ntBASIC16.86■□□□□ 0.29
PCK1P35558 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.86■□□□□ 0.29
PCK1P35558 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.86■□□□□ 0.29
PCK1P35558 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.86■□□□□ 0.29
PCK1P35558 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PCK1P35558 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.86■□□□□ 0.29
PCK1P35558 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCK1P35558 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.86■□□□□ 0.29
PCK1P35558 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.86■□□□□ 0.29
PCK1P35558 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCK1P35558 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.86■□□□□ 0.29
PCK1P35558 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.85■□□□□ 0.29
PCK1P35558 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.85■□□□□ 0.29
PCK1P35558 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.85■□□□□ 0.29
PCK1P35558 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCK1P35558 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.85■□□□□ 0.29
PCK1P35558 HLA-H-201ENST00000383620 1096 ntBASIC16.85■□□□□ 0.29
PCK1P35558 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.85■□□□□ 0.29
PCK1P35558 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.85■□□□□ 0.29
PCK1P35558 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PCK1P35558 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.85■□□□□ 0.29
PCK1P35558 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.85■□□□□ 0.29
PCK1P35558 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
PCK1P35558 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.85■□□□□ 0.29
PCK1P35558 AC105339.1-204ENST00000636249 355 ntBASIC16.85■□□□□ 0.29
PCK1P35558 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.85■□□□□ 0.29
PCK1P35558 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.85■□□□□ 0.29
PCK1P35558 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.85■□□□□ 0.29
PCK1P35558 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PCK1P35558 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
PCK1P35558 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCK1P35558 AC092384.3-202ENST00000564646 2873 ntBASIC16.85■□□□□ 0.29
PCK1P35558 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCK1P35558 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.85■□□□□ 0.29
PCK1P35558 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms