Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.72□□□□□ -0.21
CD40P25942 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.72□□□□□ -0.21
CD40P25942 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 DGCR5-201ENST00000399539 862 ntBASIC13.72□□□□□ -0.21
CD40P25942 COX5BP8-201ENST00000416911 349 ntBASIC13.72□□□□□ -0.21
CD40P25942 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.72□□□□□ -0.21
CD40P25942 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CD40P25942 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.72□□□□□ -0.21
CD40P25942 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.72□□□□□ -0.21
CD40P25942 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40P25942 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.72□□□□□ -0.21
CD40P25942 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.72□□□□□ -0.21
CD40P25942 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CD40P25942 RARRES2P5-201ENST00000564013 466 ntBASIC13.72□□□□□ -0.21
CD40P25942 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40P25942 AC093726.1-201ENST00000608064 963 ntBASIC13.72□□□□□ -0.21
CD40P25942 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.72□□□□□ -0.21
CD40P25942 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
CD40P25942 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CD40P25942 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CD40P25942 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.72□□□□□ -0.21
CD40P25942 AC138969.3-201ENST00000546612 1459 ntBASIC13.72□□□□□ -0.21
CD40P25942 AC138932.2-201ENST00000548268 1459 ntBASIC13.72□□□□□ -0.21
CD40P25942 AC126755.4-201ENST00000549796 1459 ntBASIC13.72□□□□□ -0.21
CD40P25942 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40P25942 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CD40P25942 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.72□□□□□ -0.21
CD40P25942 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CD40P25942 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CD40P25942 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CD40P25942 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.72□□□□□ -0.21
CD40P25942 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40P25942 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CD40P25942 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40P25942 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CD40P25942 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40P25942 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40P25942 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CD40P25942 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CD40P25942 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40P25942 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40P25942 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CD40P25942 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40P25942 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 AC011477.6-201ENST00000604980 1927 ntBASIC13.71□□□□□ -0.21
CD40P25942 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.71□□□□□ -0.21
CD40P25942 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CD40P25942 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40P25942 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CD40P25942 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CD40P25942 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
CD40P25942 AP006294.1-201ENST00000415407 339 ntBASIC13.71□□□□□ -0.21
CD40P25942 AC074338.1-201ENST00000416825 156 ntBASIC13.71□□□□□ -0.21
CD40P25942 AC136604.1-201ENST00000418535 575 ntBASIC13.71□□□□□ -0.21
CD40P25942 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.71□□□□□ -0.21
CD40P25942 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40P25942 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40P25942 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.71□□□□□ -0.21
CD40P25942 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40P25942 MYCLP2-201ENST00000449268 967 ntBASIC13.71□□□□□ -0.21
CD40P25942 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.71□□□□□ -0.21
CD40P25942 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.71□□□□□ -0.21
CD40P25942 AC123567.1-201ENST00000548294 1261 ntBASIC13.71□□□□□ -0.21
CD40P25942 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.71□□□□□ -0.21
CD40P25942 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.71□□□□□ -0.21
CD40P25942 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40P25942 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40P25942 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40P25942 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40P25942 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40P25942 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.71□□□□□ -0.22
CD40P25942 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms