Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CCL1P22362 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CCL1P22362 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CCL1P22362 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL1P22362 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CCL1P22362 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CCL1P22362 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL1P22362 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.71□□□□□ -0.21
CCL1P22362 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 AL592309.1-201ENST00000443127 649 ntBASIC13.71□□□□□ -0.21
CCL1P22362 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL1P22362 KRT18P58-201ENST00000527480 1120 ntBASIC13.71□□□□□ -0.21
CCL1P22362 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL1P22362 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL1P22362 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCL1P22362 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
CCL1P22362 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CCL1P22362 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CCL1P22362 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL1P22362 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 AL513477.1-201ENST00000602865 2407 ntBASIC13.71□□□□□ -0.22
CCL1P22362 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL1P22362 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL1P22362 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CCL1P22362 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL1P22362 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CCL1P22362 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 UXT-AS1-201ENST00000590504 1525 ntBASIC13.7□□□□□ -0.22
CCL1P22362 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL1P22362 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL1P22362 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CCL1P22362 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL1P22362 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.7□□□□□ -0.22
CCL1P22362 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL1P22362 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 HTR5BP-201ENST00000430851 1154 ntBASIC13.7□□□□□ -0.22
CCL1P22362 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL1P22362 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL1P22362 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL1P22362 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL1P22362 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CCL1P22362 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.7□□□□□ -0.22
CCL1P22362 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL1P22362 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL1P22362 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL1P22362 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
CCL1P22362 TCAF2P1-201ENST00000291129 2421 ntBASIC13.7□□□□□ -0.22
CCL1P22362 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL1P22362 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.7□□□□□ -0.22
CCL1P22362 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL1P22362 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CCL1P22362 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL1P22362 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL1P22362 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL1P22362 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL1P22362 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL1P22362 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL1P22362 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL1P22362 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL1P22362 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCL1P22362 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CCL1P22362 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCL1P22362 FER1L4-210ENST00000615531 5998 ntBASIC13.69□□□□□ -0.22
CCL1P22362 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL1P22362 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms