Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ERCC3P19447 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ERCC3P19447 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ERCC3P19447 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC3P19447 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC3P19447 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC3P19447 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC3P19447 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC3P19447 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
ERCC3P19447 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.47■□□□□ 0.55
ERCC3P19447 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC3P19447 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.47■□□□□ 0.55
ERCC3P19447 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC3P19447 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC3P19447 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ERCC3P19447 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC3P19447 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.47■□□□□ 0.55
ERCC3P19447 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
ERCC3P19447 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
ERCC3P19447 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
ERCC3P19447 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
ERCC3P19447 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.46■□□□□ 0.55
ERCC3P19447 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.46■□□□□ 0.55
ERCC3P19447 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
ERCC3P19447 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ERCC3P19447 MIR658-201ENST00000385210 100 ntBASIC18.46■□□□□ 0.55
ERCC3P19447 TMEM14DP-201ENST00000422205 345 ntBASIC18.46■□□□□ 0.55
ERCC3P19447 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.46■□□□□ 0.55
ERCC3P19447 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.46■□□□□ 0.55
ERCC3P19447 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.46■□□□□ 0.55
ERCC3P19447 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.46■□□□□ 0.55
ERCC3P19447 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.46■□□□□ 0.55
ERCC3P19447 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.46■□□□□ 0.55
ERCC3P19447 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.46■□□□□ 0.55
ERCC3P19447 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.46■□□□□ 0.55
ERCC3P19447 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.46■□□□□ 0.55
ERCC3P19447 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.46■□□□□ 0.55
ERCC3P19447 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.46■□□□□ 0.55
ERCC3P19447 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.46■□□□□ 0.55
ERCC3P19447 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.46■□□□□ 0.55
ERCC3P19447 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.46■□□□□ 0.55
ERCC3P19447 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
ERCC3P19447 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC3P19447 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
ERCC3P19447 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
ERCC3P19447 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.46■□□□□ 0.54
ERCC3P19447 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
ERCC3P19447 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ERCC3P19447 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
ERCC3P19447 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
ERCC3P19447 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
ERCC3P19447 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ERCC3P19447 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.45■□□□□ 0.54
ERCC3P19447 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ERCC3P19447 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ERCC3P19447 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ERCC3P19447 RPS2P32-201ENST00000439199 892 ntBASIC18.45■□□□□ 0.54
ERCC3P19447 AC022210.1-201ENST00000449856 793 ntBASIC18.45■□□□□ 0.54
ERCC3P19447 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.45■□□□□ 0.54
ERCC3P19447 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.45■□□□□ 0.54
ERCC3P19447 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.45■□□□□ 0.54
ERCC3P19447 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.45■□□□□ 0.54
ERCC3P19447 RRP7BP-205ENST00000566851 833 ntBASIC18.45■□□□□ 0.54
ERCC3P19447 MIR8072-201ENST00000614241 80 ntBASIC18.45■□□□□ 0.54
ERCC3P19447 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.45■□□□□ 0.54
ERCC3P19447 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.45■□□□□ 0.54
ERCC3P19447 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC3P19447 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms