Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.77■□□□□ 0.44
COL11A1P12107 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.77■□□□□ 0.44
COL11A1P12107 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.77■□□□□ 0.44
COL11A1P12107 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.77■□□□□ 0.44
COL11A1P12107 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.77■□□□□ 0.44
COL11A1P12107 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.77■□□□□ 0.44
COL11A1P12107 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL11A1P12107 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL11A1P12107 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
COL11A1P12107 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL11A1P12107 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COL11A1P12107 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.77■□□□□ 0.43
COL11A1P12107 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.77■□□□□ 0.43
COL11A1P12107 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.77■□□□□ 0.43
COL11A1P12107 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
COL11A1P12107 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
COL11A1P12107 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL11A1P12107 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL11A1P12107 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
COL11A1P12107 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.76■□□□□ 0.43
COL11A1P12107 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.76■□□□□ 0.43
COL11A1P12107 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.76■□□□□ 0.43
COL11A1P12107 POM121L8P-201ENST00000417732 1281 ntBASIC17.76■□□□□ 0.43
COL11A1P12107 POM121L9P-203ENST00000441984 1285 ntBASIC17.76■□□□□ 0.43
COL11A1P12107 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.76■□□□□ 0.43
COL11A1P12107 PFN1P12-201ENST00000455938 534 ntBASIC17.76■□□□□ 0.43
COL11A1P12107 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.76■□□□□ 0.43
COL11A1P12107 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 AL118558.3-201ENST00000607414 1079 ntBASIC17.76■□□□□ 0.43
COL11A1P12107 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL11A1P12107 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
COL11A1P12107 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL11A1P12107 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COL11A1P12107 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL11A1P12107 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COL11A1P12107 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.75■□□□□ 0.43
COL11A1P12107 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL11A1P12107 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.75■□□□□ 0.43
COL11A1P12107 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
COL11A1P12107 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL11A1P12107 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.75■□□□□ 0.43
COL11A1P12107 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.75■□□□□ 0.43
COL11A1P12107 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.75■□□□□ 0.43
COL11A1P12107 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.75■□□□□ 0.43
COL11A1P12107 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.75■□□□□ 0.43
COL11A1P12107 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.75■□□□□ 0.43
COL11A1P12107 AL354989.2-201ENST00000435838 1540 ntBASIC17.75■□□□□ 0.43
COL11A1P12107 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL11A1P12107 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL11A1P12107 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL11A1P12107 KRT8P35-201ENST00000483942 1338 ntBASIC17.75■□□□□ 0.43
COL11A1P12107 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL11A1P12107 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL11A1P12107 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.75■□□□□ 0.43
COL11A1P12107 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL11A1P12107 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.75■□□□□ 0.43
COL11A1P12107 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
COL11A1P12107 KLF2P2-201ENST00000416807 1039 ntBASIC17.75■□□□□ 0.43
COL11A1P12107 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL11A1P12107 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.75■□□□□ 0.43
COL11A1P12107 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL11A1P12107 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL11A1P12107 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.75■□□□□ 0.43
COL11A1P12107 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.75■□□□□ 0.43
COL11A1P12107 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.74■□□□□ 0.43
COL11A1P12107 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.74■□□□□ 0.43
COL11A1P12107 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.74■□□□□ 0.43
COL11A1P12107 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.74■□□□□ 0.43
COL11A1P12107 AL158070.2-201ENST00000623713 1621 ntBASIC17.74■□□□□ 0.43
COL11A1P12107 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.74■□□□□ 0.43
COL11A1P12107 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.74■□□□□ 0.43
COL11A1P12107 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.74■□□□□ 0.43
COL11A1P12107 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.74■□□□□ 0.43
COL11A1P12107 AC073413.1-201ENST00000603927 732 ntBASIC17.74■□□□□ 0.43
COL11A1P12107 AL139099.5-201ENST00000635274 300 ntBASIC17.74■□□□□ 0.43
COL11A1P12107 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.74■□□□□ 0.43
COL11A1P12107 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 CYP2T1P-202ENST00000641596 2535 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms