Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.74■□□□□ 0.59
TOP1P11387 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
TOP1P11387 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TOP1P11387 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.74■□□□□ 0.59
TOP1P11387 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TOP1P11387 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.74■□□□□ 0.59
TOP1P11387 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.74■□□□□ 0.59
TOP1P11387 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.74■□□□□ 0.59
TOP1P11387 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.74■□□□□ 0.59
TOP1P11387 SDHAP3-202ENST00000515467 728 ntBASIC18.74■□□□□ 0.59
TOP1P11387 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.74■□□□□ 0.59
TOP1P11387 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.74■□□□□ 0.59
TOP1P11387 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.74■□□□□ 0.59
TOP1P11387 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 HYMAI-201ENST00000635591 3347 ntBASIC18.74■□□□□ 0.59
TOP1P11387 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TOP1P11387 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
TOP1P11387 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TOP1P11387 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.73■□□□□ 0.59
TOP1P11387 AC135586.1-201ENST00000539323 574 ntBASIC18.73■□□□□ 0.59
TOP1P11387 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.73■□□□□ 0.59
TOP1P11387 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.73■□□□□ 0.59
TOP1P11387 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
TOP1P11387 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.73■□□□□ 0.59
TOP1P11387 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
TOP1P11387 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.73■□□□□ 0.59
TOP1P11387 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.73■□□□□ 0.59
TOP1P11387 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
TOP1P11387 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOP1P11387 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TOP1P11387 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.72■□□□□ 0.59
TOP1P11387 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.72■□□□□ 0.59
TOP1P11387 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
TOP1P11387 AC134407.2-201ENST00000625089 1978 ntBASIC18.72■□□□□ 0.59
TOP1P11387 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TOP1P11387 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TOP1P11387 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.72■□□□□ 0.59
TOP1P11387 AZGP1P1-201ENST00000411909 902 ntBASIC18.72■□□□□ 0.59
TOP1P11387 AC114501.2-201ENST00000439631 535 ntBASIC18.72■□□□□ 0.59
TOP1P11387 SPTLC1P1-201ENST00000447199 261 ntBASIC18.72■□□□□ 0.59
TOP1P11387 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.72■□□□□ 0.59
TOP1P11387 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.72■□□□□ 0.59
TOP1P11387 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.72■□□□□ 0.59
TOP1P11387 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.72■□□□□ 0.59
TOP1P11387 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TOP1P11387 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TOP1P11387 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.72■□□□□ 0.59
TOP1P11387 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 AL596257.1-201ENST00000641463 2694 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms