Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.98□□□□□ -0.49
SMIM17P0DL12 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMIM17P0DL12 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMIM17P0DL12 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMIM17P0DL12 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMIM17P0DL12 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMIM17P0DL12 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMIM17P0DL12 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.98□□□□□ -0.49
SMIM17P0DL12 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SMIM17P0DL12 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
SMIM17P0DL12 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SMIM17P0DL12 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.98□□□□□ -0.49
SMIM17P0DL12 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.98□□□□□ -0.49
SMIM17P0DL12 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.98□□□□□ -0.49
SMIM17P0DL12 LINC02447-202ENST00000501888 2146 ntBASIC11.98□□□□□ -0.49
SMIM17P0DL12 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMIM17P0DL12 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
SMIM17P0DL12 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.98□□□□□ -0.49
SMIM17P0DL12 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.97□□□□□ -0.49
SMIM17P0DL12 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 PPT1-215ENST00000641471 2368 ntBASIC11.97□□□□□ -0.49
SMIM17P0DL12 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 TMPOP1-202ENST00000424642 1267 ntBASIC11.97□□□□□ -0.49
SMIM17P0DL12 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 AC012615.1-201ENST00000565797 1299 ntBASIC11.97□□□□□ -0.49
SMIM17P0DL12 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 AL139424.1-201ENST00000607572 797 ntBASIC11.97□□□□□ -0.49
SMIM17P0DL12 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 AL589182.2-201ENST00000619332 1049 ntBASIC11.97□□□□□ -0.49
SMIM17P0DL12 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 PI4KAP1-204ENST00000612579 1703 ntBASIC11.97□□□□□ -0.49
SMIM17P0DL12 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMIM17P0DL12 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SMIM17P0DL12 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 AC092053.3-201ENST00000641308 4975 ntBASIC11.96□□□□□ -0.49
SMIM17P0DL12 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms