Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 MED15P5-201ENST00000423150 992 ntBASIC17.32■□□□□ 0.36
CCDC172P0C7W6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 AC243562.2-201ENST00000561247 970 ntBASIC17.32■□□□□ 0.36
CCDC172P0C7W6 AC106730.1-201ENST00000566722 1090 ntBASIC17.32■□□□□ 0.36
CCDC172P0C7W6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 AL513190.1-201ENST00000621254 727 ntBASIC17.32■□□□□ 0.36
CCDC172P0C7W6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 AL009178.2-201ENST00000597278 2719 ntBASIC17.32■□□□□ 0.36
CCDC172P0C7W6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC172P0C7W6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC172P0C7W6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 AL671277.1-201ENST00000429656 993 ntBASIC17.3■□□□□ 0.36
CCDC172P0C7W6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 FDX1P1-201ENST00000449115 551 ntBASIC17.3■□□□□ 0.36
CCDC172P0C7W6 RN7SL589P-201ENST00000481268 310 ntBASIC17.3■□□□□ 0.36
CCDC172P0C7W6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 AC099522.2-201ENST00000607001 744 ntBASIC17.3■□□□□ 0.36
CCDC172P0C7W6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 AC008267.7-201ENST00000624570 1194 ntBASIC17.3■□□□□ 0.36
CCDC172P0C7W6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms