Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.79■□□□□ 0.44
CYP3A4P08684 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CYP3A4P08684 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CYP3A4P08684 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CYP3A4P08684 DGCR5-201ENST00000399539 862 ntBASIC17.79■□□□□ 0.44
CYP3A4P08684 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.79■□□□□ 0.44
CYP3A4P08684 FAM86LP-201ENST00000478302 853 ntBASIC17.79■□□□□ 0.44
CYP3A4P08684 ELK1P1-201ENST00000485699 580 ntBASIC17.79■□□□□ 0.44
CYP3A4P08684 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.79■□□□□ 0.44
CYP3A4P08684 AL596325.1-201ENST00000563991 1082 ntBASIC17.79■□□□□ 0.44
CYP3A4P08684 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.79■□□□□ 0.44
CYP3A4P08684 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.79■□□□□ 0.44
CYP3A4P08684 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CYP3A4P08684 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CYP3A4P08684 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.78■□□□□ 0.44
CYP3A4P08684 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.78■□□□□ 0.44
CYP3A4P08684 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 OR6D1P-203ENST00000641209 4860 ntBASIC17.78■□□□□ 0.44
CYP3A4P08684 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CYP3A4P08684 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.78■□□□□ 0.44
CYP3A4P08684 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
CYP3A4P08684 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CYP3A4P08684 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.78■□□□□ 0.44
CYP3A4P08684 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
CYP3A4P08684 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.78■□□□□ 0.44
CYP3A4P08684 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.78■□□□□ 0.44
CYP3A4P08684 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.78■□□□□ 0.44
CYP3A4P08684 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.78■□□□□ 0.44
CYP3A4P08684 AC092552.1-201ENST00000547243 906 ntBASIC17.78■□□□□ 0.44
CYP3A4P08684 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.78■□□□□ 0.44
CYP3A4P08684 BRI3BPP1-201ENST00000594224 787 ntBASIC17.78■□□□□ 0.44
CYP3A4P08684 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.78■□□□□ 0.44
CYP3A4P08684 AL358472.5-202ENST00000641448 1267 ntBASIC17.78■□□□□ 0.44
CYP3A4P08684 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CYP3A4P08684 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CYP3A4P08684 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CYP3A4P08684 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.78■□□□□ 0.44
CYP3A4P08684 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP3A4P08684 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.78■□□□□ 0.44
CYP3A4P08684 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CYP3A4P08684 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CYP3A4P08684 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.77■□□□□ 0.44
CYP3A4P08684 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP3A4P08684 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CYP3A4P08684 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP3A4P08684 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP3A4P08684 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP3A4P08684 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP3A4P08684 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP3A4P08684 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CYP3A4P08684 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP3A4P08684 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP3A4P08684 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP3A4P08684 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP3A4P08684 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.77■□□□□ 0.44
CYP3A4P08684 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.77■□□□□ 0.44
CYP3A4P08684 WASH4P-201ENST00000564273 1246 ntBASIC17.77■□□□□ 0.44
CYP3A4P08684 CTBP2P3-201ENST00000585629 1255 ntBASIC17.77■□□□□ 0.44
CYP3A4P08684 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.77■□□□□ 0.44
CYP3A4P08684 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.77■□□□□ 0.44
CYP3A4P08684 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CYP3A4P08684 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
CYP3A4P08684 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
CYP3A4P08684 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CYP3A4P08684 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CYP3A4P08684 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CYP3A4P08684 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.77■□□□□ 0.43
CYP3A4P08684 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CYP3A4P08684 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.76■□□□□ 0.43
CYP3A4P08684 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.76■□□□□ 0.43
CYP3A4P08684 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms