Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSN3P07498 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CSN3P07498 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSN3P07498 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 AKAP8P1-201ENST00000434743 1349 ntBASIC12.65□□□□□ -0.38
CSN3P07498 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CSN3P07498 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 WASH6P-202ENST00000359512 1437 ntBASIC12.65□□□□□ -0.38
CSN3P07498 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CSN3P07498 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 CNN2P11-201ENST00000429351 262 ntBASIC12.65□□□□□ -0.38
CSN3P07498 SPDYE11-202ENST00000450699 704 ntBASIC12.65□□□□□ -0.38
CSN3P07498 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 AP000344.2-201ENST00000512987 629 ntBASIC12.65□□□□□ -0.38
CSN3P07498 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 SPDYE9P-201ENST00000570642 692 ntBASIC12.65□□□□□ -0.38
CSN3P07498 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.65□□□□□ -0.38
CSN3P07498 SPDYE10P-202ENST00000612005 668 ntBASIC12.65□□□□□ -0.38
CSN3P07498 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.65□□□□□ -0.38
CSN3P07498 SPDYE8P-202ENST00000612377 668 ntBASIC12.65□□□□□ -0.38
CSN3P07498 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CSN3P07498 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.65□□□□□ -0.38
CSN3P07498 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.65□□□□□ -0.38
CSN3P07498 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSN3P07498 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.65□□□□□ -0.38
CSN3P07498 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CSN3P07498 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CSN3P07498 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CSN3P07498 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CSN3P07498 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CSN3P07498 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.64□□□□□ -0.39
CSN3P07498 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CSN3P07498 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CSN3P07498 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
CSN3P07498 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.64□□□□□ -0.39
CSN3P07498 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CSN3P07498 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.64□□□□□ -0.39
CSN3P07498 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CSN3P07498 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.64□□□□□ -0.39
CSN3P07498 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.64□□□□□ -0.39
CSN3P07498 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 TIMM8BP1-201ENST00000452384 211 ntBASIC12.64□□□□□ -0.39
CSN3P07498 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.64□□□□□ -0.39
CSN3P07498 RN7SL589P-201ENST00000481268 310 ntBASIC12.64□□□□□ -0.39
CSN3P07498 KRT8P48-201ENST00000515599 1220 ntBASIC12.64□□□□□ -0.39
CSN3P07498 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.64□□□□□ -0.39
CSN3P07498 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.64□□□□□ -0.39
CSN3P07498 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSN3P07498 AL135744.1-201ENST00000565098 629 ntBASIC12.64□□□□□ -0.39
CSN3P07498 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.64□□□□□ -0.39
CSN3P07498 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CSN3P07498 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CSN3P07498 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms