Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
TCRAP04437 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRAP04437 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
TCRAP04437 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
TCRAP04437 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TCRAP04437 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
TCRAP04437 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRAP04437 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRAP04437 MRPL20P1-201ENST00000400819 433 ntBASIC12.19□□□□□ -0.46
TCRAP04437 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.19□□□□□ -0.46
TCRAP04437 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.19□□□□□ -0.46
TCRAP04437 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRAP04437 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.19□□□□□ -0.46
TCRAP04437 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.19□□□□□ -0.46
TCRAP04437 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.19□□□□□ -0.46
TCRAP04437 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRAP04437 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.19□□□□□ -0.46
TCRAP04437 ACTL9-202ENST00000612068 1252 ntBASIC12.19□□□□□ -0.46
TCRAP04437 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TCRAP04437 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRAP04437 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
TCRAP04437 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.19□□□□□ -0.46
TCRAP04437 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRAP04437 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 AC005089.1-201ENST00000619486 2241 ntBASIC12.19□□□□□ -0.46
TCRAP04437 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.19□□□□□ -0.46
TCRAP04437 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.19□□□□□ -0.46
TCRAP04437 WASH6P-202ENST00000359512 1437 ntBASIC12.19□□□□□ -0.46
TCRAP04437 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.19□□□□□ -0.46
TCRAP04437 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TCRAP04437 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRAP04437 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.18□□□□□ -0.46
TCRAP04437 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRAP04437 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TCRAP04437 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
TCRAP04437 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
TCRAP04437 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRAP04437 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRAP04437 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TCRAP04437 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.18□□□□□ -0.46
TCRAP04437 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.18□□□□□ -0.46
TCRAP04437 FAM185BP-201ENST00000443595 716 ntBASIC12.18□□□□□ -0.46
TCRAP04437 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.18□□□□□ -0.46
TCRAP04437 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
TCRAP04437 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.18□□□□□ -0.46
TCRAP04437 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRAP04437 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRAP04437 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.18□□□□□ -0.46
TCRAP04437 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
TCRAP04437 MIR4321-201ENST00000592276 80 ntBASIC12.18□□□□□ -0.46
TCRAP04437 AL121772.3-201ENST00000610840 674 ntBASIC12.18□□□□□ -0.46
TCRAP04437 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TCRAP04437 MIR1199-201ENST00000621445 119 ntBASIC12.18□□□□□ -0.46
TCRAP04437 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRAP04437 AL645728.2-201ENST00000641974 660 ntBASIC12.18□□□□□ -0.46
TCRAP04437 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TCRAP04437 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRAP04437 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRAP04437 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRAP04437 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms