Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RAPGEF3O95398 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RAPGEF3O95398 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RAPGEF3O95398 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RAPGEF3O95398 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
RAPGEF3O95398 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF3O95398 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF3O95398 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RAPGEF3O95398 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC23.39■■□□□ 1.33
RAPGEF3O95398 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC23.39■■□□□ 1.33
RAPGEF3O95398 AC104073.2-201ENST00000453737 312 ntBASIC23.39■■□□□ 1.33
RAPGEF3O95398 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF3O95398 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF3O95398 AC125604.1-201ENST00000496255 707 ntBASIC23.39■■□□□ 1.33
RAPGEF3O95398 AC116345.2-201ENST00000512837 523 ntBASIC23.39■■□□□ 1.33
RAPGEF3O95398 CSH2-206ENST00000560142 749 ntTSL 5 BASIC23.39■■□□□ 1.33
RAPGEF3O95398 UBL5-208ENST00000593087 320 ntTSL 3 BASIC23.39■■□□□ 1.33
RAPGEF3O95398 BNIP3P13-201ENST00000599968 566 ntBASIC23.39■■□□□ 1.33
RAPGEF3O95398 AL805961.1-203ENST00000641078 1258 ntBASIC23.39■■□□□ 1.33
RAPGEF3O95398 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF3O95398 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC23.39■■□□□ 1.33
RAPGEF3O95398 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF3O95398 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF3O95398 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.39■■□□□ 1.33
RAPGEF3O95398 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF3O95398 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF3O95398 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RAPGEF3O95398 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 AC139713.2-201ENST00000641328 2723 ntBASIC23.38■■□□□ 1.33
RAPGEF3O95398 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 AC026316.1-201ENST00000398900 414 ntBASIC23.38■■□□□ 1.33
RAPGEF3O95398 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 AC021723.1-201ENST00000486306 515 ntBASIC23.38■■□□□ 1.33
RAPGEF3O95398 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 AL391280.1-201ENST00000506969 1062 ntBASIC23.38■■□□□ 1.33
RAPGEF3O95398 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 ZACNP1-201ENST00000612259 710 ntBASIC23.38■■□□□ 1.33
RAPGEF3O95398 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC23.38■■□□□ 1.33
RAPGEF3O95398 AC103691.2-201ENST00000618824 433 ntBASIC23.38■■□□□ 1.33
RAPGEF3O95398 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC23.38■■□□□ 1.33
RAPGEF3O95398 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF3O95398 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
RAPGEF3O95398 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
RAPGEF3O95398 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC23.37■■□□□ 1.33
RAPGEF3O95398 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC23.37■■□□□ 1.33
RAPGEF3O95398 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 PDIA3P2-201ENST00000428073 158 ntBASIC23.37■■□□□ 1.33
RAPGEF3O95398 NOC2LP1-201ENST00000450578 752 ntBASIC23.37■■□□□ 1.33
RAPGEF3O95398 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC23.37■■□□□ 1.33
RAPGEF3O95398 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
RAPGEF3O95398 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
RAPGEF3O95398 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC23.37■■□□□ 1.33
RAPGEF3O95398 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 AC012044.1-201ENST00000603431 297 ntBASIC23.37■■□□□ 1.33
RAPGEF3O95398 AC087045.2-201ENST00000606279 1003 ntBASIC23.37■■□□□ 1.33
RAPGEF3O95398 WT1-AS_6.1-201ENST00000614919 121 ntBASIC23.37■■□□□ 1.33
RAPGEF3O95398 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
RAPGEF3O95398 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC23.37■■□□□ 1.33
RAPGEF3O95398 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF3O95398 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF3O95398 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF3O95398 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF3O95398 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF3O95398 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF3O95398 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms