Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CLN5O75503 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 HCG4P8-203ENST00000443049 980 ntBASIC13.13□□□□□ -0.31
CLN5O75503 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.13□□□□□ -0.31
CLN5O75503 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.13□□□□□ -0.31
CLN5O75503 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.13□□□□□ -0.31
CLN5O75503 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.13□□□□□ -0.31
CLN5O75503 MTDHP4-201ENST00000600287 670 ntBASIC13.13□□□□□ -0.31
CLN5O75503 AC008608.2-201ENST00000606089 416 ntBASIC13.13□□□□□ -0.31
CLN5O75503 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.13□□□□□ -0.31
CLN5O75503 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CLN5O75503 AC004706.3-202ENST00000621574 984 ntBASIC13.13□□□□□ -0.31
CLN5O75503 AF228730.7-201ENST00000641842 219 ntBASIC13.13□□□□□ -0.31
CLN5O75503 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLN5O75503 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLN5O75503 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.13□□□□□ -0.31
CLN5O75503 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLN5O75503 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.13□□□□□ -0.31
CLN5O75503 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.13□□□□□ -0.31
CLN5O75503 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.13□□□□□ -0.31
CLN5O75503 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CLN5O75503 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.13□□□□□ -0.31
CLN5O75503 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.13□□□□□ -0.31
CLN5O75503 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLN5O75503 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.12□□□□□ -0.31
CLN5O75503 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CLN5O75503 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CLN5O75503 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 MIR1224-201ENST00000408193 85 ntBASIC13.12□□□□□ -0.31
CLN5O75503 FGFR3P6-201ENST00000457012 610 ntBASIC13.12□□□□□ -0.31
CLN5O75503 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.12□□□□□ -0.31
CLN5O75503 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CLN5O75503 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 SART3-203ENST00000546611 1184 ntBASIC13.12□□□□□ -0.31
CLN5O75503 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.12□□□□□ -0.31
CLN5O75503 AC091304.2-201ENST00000564639 760 ntBASIC13.12□□□□□ -0.31
CLN5O75503 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.12□□□□□ -0.31
CLN5O75503 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 LINC01711-201ENST00000598340 967 ntBASIC13.12□□□□□ -0.31
CLN5O75503 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.12□□□□□ -0.31
CLN5O75503 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CLN5O75503 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.12□□□□□ -0.31
CLN5O75503 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.12□□□□□ -0.31
CLN5O75503 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CLN5O75503 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CLN5O75503 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.12□□□□□ -0.31
CLN5O75503 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CLN5O75503 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CLN5O75503 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CLN5O75503 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLN5O75503 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms