Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 BX276092.2-201ENST00000417668 665 ntBASIC14.23□□□□□ -0.13
PFDN1O60925 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.23□□□□□ -0.13
PFDN1O60925 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.23□□□□□ -0.13
PFDN1O60925 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 PRKY-204ENST00000533551 1019 ntBASIC14.23□□□□□ -0.13
PFDN1O60925 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.23□□□□□ -0.13
PFDN1O60925 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.23□□□□□ -0.13
PFDN1O60925 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.22□□□□□ -0.13
PFDN1O60925 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PFDN1O60925 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 AC152010.1-201ENST00000415779 2006 ntBASIC14.22□□□□□ -0.13
PFDN1O60925 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.22□□□□□ -0.13
PFDN1O60925 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.22□□□□□ -0.13
PFDN1O60925 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.22□□□□□ -0.13
PFDN1O60925 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PFDN1O60925 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PFDN1O60925 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 POM121L13P-201ENST00000422362 380 ntBASIC14.22□□□□□ -0.13
PFDN1O60925 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.22□□□□□ -0.13
PFDN1O60925 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.22□□□□□ -0.13
PFDN1O60925 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PFDN1O60925 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 AC011767.1-201ENST00000617410 1153 ntBASIC14.22□□□□□ -0.13
PFDN1O60925 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.22□□□□□ -0.13
PFDN1O60925 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.22□□□□□ -0.13
PFDN1O60925 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.22□□□□□ -0.13
PFDN1O60925 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.22□□□□□ -0.13
PFDN1O60925 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PFDN1O60925 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
PFDN1O60925 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.22□□□□□ -0.13
PFDN1O60925 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.22□□□□□ -0.13
PFDN1O60925 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PFDN1O60925 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PFDN1O60925 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PFDN1O60925 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC14.21□□□□□ -0.13
PFDN1O60925 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC14.21□□□□□ -0.13
PFDN1O60925 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PFDN1O60925 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.21□□□□□ -0.13
PFDN1O60925 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.21□□□□□ -0.13
PFDN1O60925 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PFDN1O60925 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PFDN1O60925 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.21□□□□□ -0.13
PFDN1O60925 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.21□□□□□ -0.13
PFDN1O60925 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.21□□□□□ -0.13
PFDN1O60925 NBPF21P-201ENST00000425093 1451 ntBASIC14.21□□□□□ -0.13
PFDN1O60925 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC14.21□□□□□ -0.13
PFDN1O60925 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms